My work uses agricultural systems as a platform to explore scholarly questions about climate resilience, with the overarching goal of improving socio-economic justice and equity. My research can be categorized as studying food security, climate resilience, and nutrient management. My specific research aims are to reduce pollutants, including greenhouse gases, improve crop nutrition, store soil carbon, and increase water use efficiency.

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te Pas, EEEM., E. Chang, A.R. Marklein, R.N.J. Comans, M. Hagens. Accounting for retarded weathering products in comparing methods for quantifying carbon dioxide removal in a short-term enhanced weathering study. Frontiers in Climate, 2025.

Mooshammer, M., C. Shrieves, E. Chang, A.R. Marklein, A.J. Woodill, A. Wolf. A direct measurement framework for Enhanced Rock Weathering. CDRXIV, 2024.

Kantola, I.B., E. Blanc‐Betes,  M.D. Masters, E. Chang, A.R. Marklein, C.E. Moore, A. von Haden, C.J. Bernacchi, A. Wolf, D.Z. Epihov, D.J. Beerling, E.H. DeLucia. Improved net carbon budgets in the US Midwest through direct measured impacts of enhanced weathering. Global Change Biology, 2023.

Jeong, S., M.L. Fischer, H. Breunig,A.R. Marklein, F.M. Hopkins, S.C. Biraud. Artificial Intelligence         Approach for Estimating Dairy Methane Emissions. Environmental Sciences and Technology, 2022.

Heerah, S., I. Frausto-Vicencio, A.R. Marklein, M.L. Fischer, Y. Ding, H. Parker, F.M. Hopkins, M. Dubey. Magnitude and seasonality of dairy methane emissions in California’s San Joaquin Valley inferred using ground-based remote sensing observations. Journal of GeophysicalResearch: Atmospheres, 2021.

Woo, D.K., W.J. Riley, A. Paez-Garcia, A.R. Marklein, Z. Mekonnen, X. Liu, X.F. Ma, E. Blancaflor, Y. Wo. Impoverishing roots will improve wheat yield and profitability through increased water and nitrogen use efficiencies. Journal of Geophysical Research – Biogeosciences, 2021.

McCullagh, E.A., F. Bernardi, M. Malta, K. Nowak, A.R. Marklein, K. Van Horne, T.L. Clark, S.J. Cheng, M. Zaringhalam, L.L. Edwards. Assessing Gage: an online tool for improving gender visibility in STEMM. FACETS, 2021.

A.R. Marklein, D. Meyer, M.L. Fischer, S. Jeong, T. Rafiq, M. Carr, F.M. Hopkins. Facility scale inventory of dairy methane emissions in California: Implications for mitigation. Earth Systems Science Data, 2020.

A.R. Marklein, P.S. Nico, E. Elias, K. Steenwerth. Projected temperature increases may require shifts in the growing season of cool-season crops and the growing locations of warm-season crops. Science of the Total Environment, 2020.

R.R. Thiruvenkatachari, V. Carranza, F. Ahangar, A.R. Marklein, F. Hopkins. “Uncertainty in using dispersion models to estimate methane emissions from manure lagoons in dairies.” Agricultural and Forest Meteorology, 2020.

M. Schaefer, N. Bogie, D. Rath, A.R. Marklein, A. Garniwan, T. Haensel, Y. Lin, C. Avila, P. Nico, K. Scow, E. Brodie, W.J. Riley, M. Fogel, A. Berhe, T. Ghezzehei, S. Parikh, M. Keiluweit, S. Ying. “Effect of cover crop on carbon distribution in size and density separated soil aggregates.” Soil Systems, 2020.

S.J. Cheng, N.G. Smith, W.W. Wieder, A.R. Marklein. “Modeling global change ecology in a 410+ ppm CO2 world.” Eos, 2018.

E. Elias, A.R. Marklein, J.T. Abatzoglou, J. Bialesandro, J. Brown, C. Steele, A. Rango, K. Steenwerth.Vulnerability of field crops to midcentury temperature changes and yield effects in the Southwestern United States.” Climatic Change 2017.

Marklein, A.R., J.B. Cookingham, S.K. Enders, D.J.X. Gonzalez, T.L. van Huysen, J.E. Izquierdo, D.R. Light, D. Liptzin, K.E. Miller, S.L. Morford, R.A. Norton, B.Z. Houlton. Mineralization ratios of nitrogen and phosphorus from decomposing litter in temperate versus tropical forests. Global Ecology and Biogeography, 2015.

Houlton, B.Z, A.R Marklein, E. Bai. “Representation of nitrogen in climate change forecasts.” Nature Climate Change, 2015.

Huang, W., B.Z. Houlton, A.R. Marklein, J. Liu, G. Zhou. “Plant stoichiometric responses to elevated CO2 vary with nitrogen and phosphorus inputs.” Scientific Reports, 2015. (Biology Faculty of 1000 selection)

Cleveland, C., B.Z. Houlton, W.K. Smith, A.R. Marklein, S.C. Reed, W. Parton, S. Del Grosso, S.W. Running. Patterns of new production point to sustained CO2 uptake capacity in tropical forests.” Proceedings of the National Academy of Sciences, 2013.

Marklein, A.R., B.Z. Houlton. Nitrogen inputs accelerate phosphorus cycling rates across a wide variety of terrestrial ecosystems New Phytologist, 2011.

Cleveland, C., A. Townsend, S. Alvarez-Clare, M. Bustamante, G. Chuyongs, P. Grierson, K. Harms, B. Houlton, A.R. Marklein, W. Parton, S. Porder, S. Reed, C. Sierra, W. Silver, P. Taylor, E. Tanner, W. Wieder. “Relationships among net primary productivity, nutrients, and climate in tropical rain forest: a pan-tropical analysis.” Ecology Letters, 2011.

Pimentel, D. A.R. Marklein, M. Toth, M. Karpoff, G. Paul, R. McCormack, J. Kyriazis and T. Krueger. “Why we should not be using biofuels” in Food versus Fuel: An Informed Introduction to Biofuels, F. Rosillo-Calle and F. Johnson, Eds. Zed Books, 2010, pp 29-57.

Pimentel, D., A.R. Marklein, M. Toth, M. Karpoff, G. Paul, R. McCormack, J. Kyriazis, T. Krueger. “Environmental and Economic Costs of Biofuels” in Human Ecology, D. Bates and J. Tucker, Eds. Springer, 2010, pp 349-360. 

Pimentel, D., A.R. Marklein, M. Toth, M. Karpoff, G. Paul, R. McCormack, J. Kyriazis, T. Krueger. “Food Versus Biofuels: Environmental and Economic Costs.” Human Ecology, 2009.

Pimentel, D., A.R. Marklein, M. Toth, M. Karpoff, G. Paul, R McCormack, J. Kyriazis, T. Krueger. “Biofuel Impacts on World Food Supply: Use of Fossil Fuel, Land and Water Resources.” Energies, 2008.

Rhesus Macaque Genome Sequencing and Analysis Consortium: Gibbs, R., […] A.R. Marklein et al.Evolutionary and biomedical insights from the Rhesus Macaque Genome.” Science, 2007.